Scaffold PTM

Confident phosphorylation site assignment and PTM validation at a glance

  • Assess site assignments for any PTM
  • Normalize by protein levels and validate peptide assignments
  • Evaluate localization probability
  • Modsites quant for labeled/precursor intensity from Q+/Q+S
  • Find motifs associated with PTMs
  • Compare modified spectrum counts across samples
  • Examine Ascore details and export publication-ready graphics
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